Revision history for Perl extension Bio::Grep. 0.2.0 Thu Mar 11 15:16:39 2007 - POD improvements - small bgrep improvements - more tests - GUUGle: upstream/downstream with query_file broken 0.1.0 Thu Mar 09 18:58:09 2007 - POD improvements - more tests - small bgrep improvements - upstream and downstream in GUUGle broken - maxhits in GUUGle broken - test searches for EMBOSS 0.0.4 Thu Mar 08 21:34:17 2007 - forgot to include perlcritic test and 00.checkprereq - POD improvements - Cleanup: removed unnecessary use lines - switched to Data::Dumper for settings->to_string() - more tests - Vmatch did not calculate query_length if complete(0) - GUUGle: reverse_complement was switched (revcom(1) was revcom(0) and vice versa). - Agrep: did not store $res->query 0.0.3 Wed Mar 07 15:13:26 2007 - POD improvements - more tests (Devel::Cover) - Vmatch now throws an exception if showdesc + upstream instead of just a warning - skip tests if bioperl and/or bioperl-run is not found 0.0.2 Thu Mar 06 01:03:43 2007 - POD improvements - bgrep did not accept -man and -help 0.0.1 Thu Mar 05 15:26:11 2007 first public release on cpan - renamed to Bio::Grep (from Weigel::Search) - added backend GUUGle - added bgrep - POD improvements - renamed querylength to query_length - added feature to specify settings in search call