Revision history for PomBase-Chobo 0.020 2018-02-19 15:19:37 Warn if "def:" lines differ when merging terms 0.019 2018-02-16 18:10:46 Require a version of List::Util that has the uniq() function to prevent failures on older Perls. 0.018 2018-02-14 20:06:21 Fixes several bugs we storing dbxrefs from "def:" lines 0.017 2018-02-14 17:28:35 Fix bug handling odd dbxrefs that have no accession 0.016 2018-02-14 17:16:01 Store dbxrefs for term definitions 0.015 2018-02-14 11:05:39 Bug fix: allow single character synonyms (eg. "I" from so-simple.obo) 0.014 2018-02-13 23:43:39 Allow escaped double quotes in synonyms - example from chebi.obo: "alpha-GalCer-6\"-(4-chlorophenyl)carbamate" RELATED [ChEBI:] 0.013 2018-02-13 20:22:12 Store the data-version from the OBO file in the cvprop table 0.012 2017-02-22 11:36:03 Exit with a non-zero code when parsing or loading fails 0.011 2016-08-18 13:09:42 Ignore trailing modifiers - See section "Trailing Modifiers" in: ftp://ftp.geneontology.org/pub/go/www/GO.format.obo-1_4.shtml#S.1.4 0.010 2016-08-11 11:18:33 Append "(obsolete)" to names of obsolete terms hen storing 0.009 2016-07-21 20:34:13 Fix parsing for stanzas that have no subset: lines 0.008 2016-07-21 20:24:28 Doc fixes Fix term synonyms parsing and add a test for it Add subsets() and is_obsolete() methods to OntologyTerm 0.007 2016-07-20 21:20:12 Fix OBO parser to read def: and comment: lines Store definition in cvterm rows 0.006 2016-06-13 12:34:29 Use "relations" as the CV name for RO, see: https://github.com/GMOD/Chado/issues/17 Documentation improvements 0.005 2016-06-08 15:47:33 Improve README.pod Improve chobo_load docs The dbi:Pg: prefix on the database name is now optional 0.004 2016-06-05 16:10:46 Handle reloading cv, db and dbxref rows Check constraints after inserting each row in the test DB 0.003 2016-06-02 14:46:28 Now explicity require Perl v5.20 (Internal) Builds correctly on Travis-CI 0.002 2016-06-01 21:58:33 Fixed installation of chobo_load by removing Build.PL 0.001 2016-06-01 21:02:38 Initial release