Revision history for BioX-Workflow-Command

2.4.1  2018-06-06 15:44:13 GST
	- Bug fix - removed Directives::MCE

2.4.0  2018-06-06 14:47:12 GST
	- Introduced Jinja templating, first example of using other languages with BioX
	- Introduced MCE for parallel processing with large number of samples
	- Introduced data_loop, is now possible to specify from the config nested loop structure
	- for sample (@samples) { for split (@splits){ T =. "{$sample}.{$split}.fastq"} }
        - Removed need for {$self->thing} in template, can instead just use {$thing}
	- Deprecated iters/lists, instead of data_loop
	- Removed __DUMMYSAMPLE__, introduced MCE for large data sets

2.3.2  2018-01-10 13:14:25 GST
	- Added inspect command
	- Pinned some versions of modules (MooseX::App, Test::Exception)

2.3.1  2017-12-05 17:29:09 GST
	- Bug fix in Debug

2.3.0  2017-11-28 09:07:04 GST
	- Added fix for multiline variables
	- Made sample_files full path
	- Added some tests
	- 2.3.0 milestone  - https://github.com/biosails/BioX-Workflow-Command/milestone/6

2.2.3  2017-09-07 13:42:07 GST
	- Fixed circular deps

2.2.2  2017-09-06 12:42:39 GST
	- Added support for Mustache templating engine
	- Fixed the Glob Type
	- 2.2.2 milestone - https://github.com/biosails/BioX-Workflow-Command/milestone/4

2.2.1  2017-08-25 05:10:43 GST
	- Removed List::MoreUtils - funky licensing

2.2.0  2017-08-24 07:39:45 GST
	- Added additional interface for custom processing of rules
	- Bug fix for samples are files but output structure should be directories.
	- Bug fixes for sample_rule/file_rule.
	- Bug fix for mixed HPC types.

2.0.10  2017-05-08 13:20:42 +04
	- Removing orphan input check

2.0.9  2017-05-08 13:02:46 +04
	- Added in iterables
	- Can now defined any_list
	- And uterate through it using use_anys (pay attention to the s)

2.0.8  2017-05-04 14:30:02 +04
	- Cleaned up logging to create a table - no more wall of text!
	- Fixed HPC meta to correctly overwrite global when global/local are arrayref of keys
	- Follow symbolic links when looking for Samples
	- Throw an error when making a directory fails

2.0.7  2017-05-01 12:32:58 +04
	- Added in chunking functionality

2.0.6  2017-04-30 10:37:27 +04
	- Bug fixes for backwards compatibility

2.0.5  2017-04-30 09:31:44 +04
	- Few changes to avoid collisions with previous BioX::Workflow

2.0.4  2017-04-27 15:12:49 +04
	- Removed extra cpanfile to clean up deps

2.0.3  2017-04-27 12:02:29 +04
        - Adding in auto_deps - automatically decide dependnecy from INPUT/OUTPUT
        - Adding in use_timestamps - Decide select_rules by last modified time