Revision history for SmotifCS 0.01 2015-4-21 * First version, released on an unsuspecting world. 0.02 2015-04-22 * File system independence Path feature was added 0.03 2015-04-23 * Fixing some error with the documentation * Fixing erro in SmotifCS/ClusterRankSmotifs.pm $lin[5] = ~s/\"//g was change to $lin[5] =~ s/\"//g 0.04 2015-04-24 * motifCS::GeometricalCalculations::get_from_file was taking like ~10 seconds to finish. It was overwritten to improve performance 0.05 2015-04-28 * motifCS::GeometricalCalculations::get_from_file was modified and does not use find functions. PDB files should be stored in one single folder. smotifcs.pls is running ~7x faster. * File::Find::Rule requirement was removed from Makefile.PL and GeometricalCalculations.pm * Documentation added to SmotiCS.pm 0.06 2015-04-29 * File::Find::Rule requirement was added to Makefile.PL; it is required by smotifcs.pl 0.07 2015-06-03 * Fix a bug in EnumerateSmotifCombinations::gen_list